CpGislandEVO is a powerful platform to investigate the function of CpG islands, as well as the evolutionary mechanisms which generate and maintain these key epigenome markers. A CpG-island database for the best assembled mammalian genome sequences is coupled to a next-generation genome browser. This allows linking together both experimental and predicted CGIs, as well as single-cytosine-resolution DNA methylation data.


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    Prediction of CpG-island function: CpG clustering vs. sliding-window methods. BMC Genomics 2010, 11:327. doi:10.1186/1471-2164-11-327
  • Michael Hackenberg, Pedro Carpena, Pedro Bernaola-Galván, Guillermo Barturen, Ángel M. Alganza and José L. Oliver. 2011. WordCluster: detecting clusters of DNA words and genomic elements Algorithms for Molecular Biology 6:2 doi:10.1186/1748-7188-6-2