There are 3 ways to use sRNAtoolbox (or parts of it):
The webserver can be accessed here: sRNAtoolbox webserver
30/05/2017. The webserver crashed. We are currently trying to recover it.
IMPORTANT NOTE: The webserver was recoverd by 12/06/2018
sRNAtoolboxVM is a virtual machine that can be executed on all common operating systems through virtualization programs like VirtualBox or VMware, providing the user with a high number of preinstalled programs like all sRNAtoolbox tools, Vienna package, bowtie, samtools etc. needed for common small RNA data analysis. The virtual machine can be downloaded here: sRNAtoolboxVM
3) Standalone versions
Currenlty sRNAbench and sRNAde can be downloaded as standalone versions (download standalone versions).